Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Gm27867-201ENSMUST00000184778 125 ntBASIC18.65■□□□□ 0.58
Hmg20bQ9Z104 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.65■□□□□ 0.58
Hmg20bQ9Z104 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmg20bQ9Z104 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmg20bQ9Z104 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Hmg20bQ9Z104 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hmg20bQ9Z104 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmg20bQ9Z104 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmg20bQ9Z104 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmg20bQ9Z104 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmg20bQ9Z104 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hmg20bQ9Z104 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hmg20bQ9Z104 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hmg20bQ9Z104 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Hmg20bQ9Z104 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Gm12895-201ENSMUST00000122214 226 ntBASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmg20bQ9Z104 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Gm12497-201ENSMUST00000138778 237 ntBASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hmg20bQ9Z104 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Gm18669-201ENSMUST00000216049 778 ntBASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20bQ9Z104 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmg20bQ9Z104 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmg20bQ9Z104 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hmg20bQ9Z104 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms