Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Gm12260-201ENSMUST00000122447 411 ntBASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcb1Q9Z0H3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Gm2213-201ENSMUST00000197485 688 ntBASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcb1Q9Z0H3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcb1Q9Z0H3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
Smarcb1Q9Z0H3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcb1Q9Z0H3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcb1Q9Z0H3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Smarcb1Q9Z0H3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcb1Q9Z0H3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcb1Q9Z0H3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcb1Q9Z0H3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcb1Q9Z0H3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcb1Q9Z0H3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Smarcb1Q9Z0H3 Mir8117-201ENSMUST00000184773 107 ntBASIC16.33■□□□□ 0.2
Smarcb1Q9Z0H3 Gm9682-201ENSMUST00000197505 556 ntBASIC16.33■□□□□ 0.2
Smarcb1Q9Z0H3 Gm45167-201ENSMUST00000208007 322 ntBASIC16.33■□□□□ 0.2
Smarcb1Q9Z0H3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcb1Q9Z0H3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcb1Q9Z0H3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcb1Q9Z0H3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcb1Q9Z0H3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Smarcb1Q9Z0H3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcb1Q9Z0H3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcb1Q9Z0H3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcb1Q9Z0H3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcb1Q9Z0H3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.32■□□□□ 0.2
Smarcb1Q9Z0H3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.32■□□□□ 0.2
Smarcb1Q9Z0H3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
Smarcb1Q9Z0H3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcb1Q9Z0H3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.32■□□□□ 0.2
Smarcb1Q9Z0H3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.32■□□□□ 0.2
Smarcb1Q9Z0H3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Smarcb1Q9Z0H3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcb1Q9Z0H3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Smarcb1Q9Z0H3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcb1Q9Z0H3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Smarcb1Q9Z0H3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms