Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nubp1Q9R060 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nubp1Q9R060 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nubp1Q9R060 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nubp1Q9R060 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nubp1Q9R060 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nubp1Q9R060 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nubp1Q9R060 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nubp1Q9R060 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nubp1Q9R060 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Nubp1Q9R060 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nubp1Q9R060 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nubp1Q9R060 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.87□□□□□ -0.19
Nubp1Q9R060 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.87□□□□□ -0.19
Nubp1Q9R060 Gm14701-201ENSMUST00000117156 348 ntBASIC13.87□□□□□ -0.19
Nubp1Q9R060 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.87□□□□□ -0.19
Nubp1Q9R060 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.87□□□□□ -0.19
Nubp1Q9R060 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.87□□□□□ -0.19
Nubp1Q9R060 Gm8502-201ENSMUST00000185708 901 ntBASIC13.87□□□□□ -0.19
Nubp1Q9R060 Gm21147-201ENSMUST00000186046 913 ntBASIC13.87□□□□□ -0.19
Nubp1Q9R060 Gm8510-201ENSMUST00000189202 895 ntBASIC13.87□□□□□ -0.19
Nubp1Q9R060 Gm2316-201ENSMUST00000190613 921 ntBASIC13.87□□□□□ -0.19
Nubp1Q9R060 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Gm43084-201ENSMUST00000200696 947 ntBASIC13.87□□□□□ -0.19
Nubp1Q9R060 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.87□□□□□ -0.19
Nubp1Q9R060 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nubp1Q9R060 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Gm37293-201ENSMUST00000191658 295 ntBASIC13.86□□□□□ -0.19
Nubp1Q9R060 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.86□□□□□ -0.19
Nubp1Q9R060 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.86□□□□□ -0.19
Nubp1Q9R060 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nubp1Q9R060 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.85□□□□□ -0.19
Nubp1Q9R060 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.85□□□□□ -0.19
Nubp1Q9R060 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.85□□□□□ -0.19
Nubp1Q9R060 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms