Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom3Q9QXN0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.81■□□□□ 0.12
Shroom3Q9QXN0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom3Q9QXN0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom3Q9QXN0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom3Q9QXN0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.81■□□□□ 0.12
Shroom3Q9QXN0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom3Q9QXN0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom3Q9QXN0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom3Q9QXN0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom3Q9QXN0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom3Q9QXN0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom3Q9QXN0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Gm5264-201ENSMUST00000190584 848 ntBASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom3Q9QXN0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom3Q9QXN0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms