Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim44Q9QXA7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim44Q9QXA7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trim44Q9QXA7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim44Q9QXA7 Gm42569-201ENSMUST00000200539 472 ntBASIC18.37■□□□□ 0.53
Trim44Q9QXA7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.37■□□□□ 0.53
Trim44Q9QXA7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim44Q9QXA7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim44Q9QXA7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Trim44Q9QXA7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim44Q9QXA7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.37■□□□□ 0.53
Trim44Q9QXA7 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Trim44Q9QXA7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim44Q9QXA7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trim44Q9QXA7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim44Q9QXA7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim44Q9QXA7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Gm44549-201ENSMUST00000208351 577 ntBASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Pcgf5-211ENSMUST00000225920 6443 ntBASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim44Q9QXA7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim44Q9QXA7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 Gm13148-201ENSMUST00000118892 745 ntBASIC18.34■□□□□ 0.53
Trim44Q9QXA7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 Gm6576-201ENSMUST00000169678 883 ntBASIC18.34■□□□□ 0.53
Trim44Q9QXA7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim44Q9QXA7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim44Q9QXA7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Trim44Q9QXA7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim44Q9QXA7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Trim44Q9QXA7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim44Q9QXA7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim44Q9QXA7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.33■□□□□ 0.53
Trim44Q9QXA7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trim44Q9QXA7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim44Q9QXA7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.33■□□□□ 0.52
Trim44Q9QXA7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trim44Q9QXA7 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim44Q9QXA7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Trim44Q9QXA7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim44Q9QXA7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim44Q9QXA7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim44Q9QXA7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim44Q9QXA7 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim44Q9QXA7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms