Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Gm37722-201ENSMUST00000193757 208 ntBASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1aQ9QWF0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1aQ9QWF0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Gm21559-201ENSMUST00000220638 855 ntBASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Gm8587-201ENSMUST00000076538 843 ntBASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1aQ9QWF0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Chaf1aQ9QWF0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chaf1aQ9QWF0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chaf1aQ9QWF0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Chaf1aQ9QWF0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chaf1aQ9QWF0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chaf1aQ9QWF0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms