Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Gm29707-201ENSMUST00000196325 491 ntBASIC16.24■□□□□ 0.19
Msh5Q9QUM7 AC125539.1-202ENSMUST00000226449 670 ntBASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Gm23634-201ENSMUST00000175071 91 ntBASIC16.23■□□□□ 0.19
Msh5Q9QUM7 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 AC125117.2-201ENSMUST00000228344 1140 ntBASIC16.23■□□□□ 0.19
Msh5Q9QUM7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh5Q9QUM7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Gm45166-201ENSMUST00000209073 683 ntBASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Gm17917-201ENSMUST00000218561 953 ntBASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Msh5Q9QUM7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Gm43066-201ENSMUST00000199589 1260 ntBASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh5Q9QUM7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
Msh5Q9QUM7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Msh5Q9QUM7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Msh5Q9QUM7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Msh5Q9QUM7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Msh5Q9QUM7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Msh5Q9QUM7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Msh5Q9QUM7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms