Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Gm8825-201ENSMUST00000182565 998 ntBASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Gm4518-201ENSMUST00000182638 718 ntBASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Gm17971-201ENSMUST00000190239 806 ntBASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ldb3Q9JKS4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ldb3Q9JKS4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ldb3Q9JKS4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Ldb3Q9JKS4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ldb3Q9JKS4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ldb3Q9JKS4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb3Q9JKS4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Birc2-201ENSMUST00000054878 378 ntBASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.32□□□□□ -0.12
Ldb3Q9JKS4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb3Q9JKS4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb3Q9JKS4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb3Q9JKS4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb3Q9JKS4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb3Q9JKS4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb3Q9JKS4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Ldb3Q9JKS4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ldb3Q9JKS4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb3Q9JKS4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb3Q9JKS4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.31□□□□□ -0.12
Ldb3Q9JKS4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.31□□□□□ -0.12
Ldb3Q9JKS4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.31□□□□□ -0.12
Ldb3Q9JKS4 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.31□□□□□ -0.12
Ldb3Q9JKS4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb3Q9JKS4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb3Q9JKS4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ldb3Q9JKS4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms