Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Matn2-206ENSMUST00000228570 2798 ntBASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.23□□□□□ -0.13
Trem1Q9JKE2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Gm11927-201ENSMUST00000118472 759 ntBASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trem1Q9JKE2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.21□□□□□ -0.13
Trem1Q9JKE2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem1Q9JKE2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem1Q9JKE2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem1Q9JKE2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trem1Q9JKE2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trem1Q9JKE2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem1Q9JKE2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.21□□□□□ -0.13
Trem1Q9JKE2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
Trem1Q9JKE2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.21□□□□□ -0.13
Trem1Q9JKE2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trem1Q9JKE2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trem1Q9JKE2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.21□□□□□ -0.13
Trem1Q9JKE2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.21□□□□□ -0.13
Trem1Q9JKE2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem1Q9JKE2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trem1Q9JKE2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem1Q9JKE2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trem1Q9JKE2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trem1Q9JKE2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trem1Q9JKE2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms