Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Gm13036-201ENSMUST00000117799 748 ntBASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.31■□□□□ 0.36
Rsph3bQ9DA80 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Rsph3bQ9DA80 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rsph3bQ9DA80 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rsph3bQ9DA80 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Rsph3bQ9DA80 Gm13216-201ENSMUST00000117145 591 ntBASIC17.3■□□□□ 0.36
Rsph3bQ9DA80 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.3■□□□□ 0.36
Rsph3bQ9DA80 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Rsph3bQ9DA80 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Rsph3bQ9DA80 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.3■□□□□ 0.36
Rsph3bQ9DA80 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rsph3bQ9DA80 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rsph3bQ9DA80 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Rsph3bQ9DA80 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rsph3bQ9DA80 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rsph3bQ9DA80 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.3■□□□□ 0.36
Rsph3bQ9DA80 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rsph3bQ9DA80 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rsph3bQ9DA80 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rsph3bQ9DA80 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Gm27628-201ENSMUST00000184911 107 ntBASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.28■□□□□ 0.36
Rsph3bQ9DA80 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.27■□□□□ 0.36
Rsph3bQ9DA80 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rsph3bQ9DA80 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rsph3bQ9DA80 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rsph3bQ9DA80 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rsph3bQ9DA80 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rsph3bQ9DA80 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rsph3bQ9DA80 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms