Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf3c6Q9D8P7 Mbnl2-204ENSMUST00000227012 2390 ntBASIC16.92■□□□□ 0.3
Gtf3c6Q9D8P7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf3c6Q9D8P7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gtf3c6Q9D8P7 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Gm25406-201ENSMUST00000157599 105 ntBASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Mir3081-201ENSMUST00000175305 84 ntBASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf3c6Q9D8P7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf3c6Q9D8P7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Gtf3c6Q9D8P7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Gtf3c6Q9D8P7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Gtf3c6Q9D8P7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Gtf3c6Q9D8P7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Gtf3c6Q9D8P7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.89■□□□□ 0.29
Gtf3c6Q9D8P7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Gtf3c6Q9D8P7 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf3c6Q9D8P7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf3c6Q9D8P7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Gtf3c6Q9D8P7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf3c6Q9D8P7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf3c6Q9D8P7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Gtf3c6Q9D8P7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf3c6Q9D8P7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Gtf3c6Q9D8P7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.88■□□□□ 0.29
Gtf3c6Q9D8P7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf3c6Q9D8P7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf3c6Q9D8P7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf3c6Q9D8P7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms