Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4bQ9D8B3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Chmp4bQ9D8B3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4bQ9D8B3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.91■□□□□ 0.78
Chmp4bQ9D8B3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4bQ9D8B3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp4bQ9D8B3 Gm44616-201ENSMUST00000206417 1732 ntBASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4bQ9D8B3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Chmp4bQ9D8B3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Chmp4bQ9D8B3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chmp4bQ9D8B3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chmp4bQ9D8B3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chmp4bQ9D8B3 Ptprs-211ENSMUST00000223859 5588 ntBASIC19.89■□□□□ 0.77
Chmp4bQ9D8B3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4bQ9D8B3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Chmp4bQ9D8B3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4bQ9D8B3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Chmp4bQ9D8B3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.89■□□□□ 0.77
Chmp4bQ9D8B3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.89■□□□□ 0.77
Chmp4bQ9D8B3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4bQ9D8B3 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.89■□□□□ 0.77
Chmp4bQ9D8B3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4bQ9D8B3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4bQ9D8B3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4bQ9D8B3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4bQ9D8B3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4bQ9D8B3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Gm14859-201ENSMUST00000117752 357 ntBASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Gm15372-201ENSMUST00000120729 834 ntBASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Gm7284-201ENSMUST00000131667 944 ntBASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Gm27357-201ENSMUST00000183754 135 ntBASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4bQ9D8B3 Gm43598-201ENSMUST00000202482 2479 ntBASIC19.87■□□□□ 0.77
Chmp4bQ9D8B3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4bQ9D8B3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4bQ9D8B3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Chmp4bQ9D8B3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
Chmp4bQ9D8B3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4bQ9D8B3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4bQ9D8B3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Chmp4bQ9D8B3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Chmp4bQ9D8B3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4bQ9D8B3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Chmp4bQ9D8B3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms