Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
U2af1Q9D883 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
U2af1Q9D883 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
U2af1Q9D883 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
U2af1Q9D883 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
U2af1Q9D883 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.78■□□□□ 0.92
U2af1Q9D883 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.78■□□□□ 0.92
U2af1Q9D883 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
U2af1Q9D883 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.78■□□□□ 0.92
U2af1Q9D883 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
U2af1Q9D883 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
U2af1Q9D883 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
U2af1Q9D883 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.78■□□□□ 0.92
U2af1Q9D883 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
U2af1Q9D883 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
U2af1Q9D883 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.77■□□□□ 0.92
U2af1Q9D883 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
U2af1Q9D883 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.77■□□□□ 0.92
U2af1Q9D883 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
U2af1Q9D883 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
U2af1Q9D883 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC20.77■□□□□ 0.92
U2af1Q9D883 Gm27646-201ENSMUST00000183989 110 ntBASIC20.77■□□□□ 0.92
U2af1Q9D883 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.77■□□□□ 0.92
U2af1Q9D883 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.77■□□□□ 0.92
U2af1Q9D883 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
U2af1Q9D883 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.77■□□□□ 0.92
U2af1Q9D883 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
U2af1Q9D883 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
U2af1Q9D883 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
U2af1Q9D883 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.77■□□□□ 0.91
U2af1Q9D883 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
U2af1Q9D883 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC20.77■□□□□ 0.91
U2af1Q9D883 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.77■□□□□ 0.91
U2af1Q9D883 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
U2af1Q9D883 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2af1Q9D883 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2af1Q9D883 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
U2af1Q9D883 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2af1Q9D883 Grk6-207ENSMUST00000225925 2769 ntBASIC20.76■□□□□ 0.91
U2af1Q9D883 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2af1Q9D883 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2af1Q9D883 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2af1Q9D883 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2af1Q9D883 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.76■□□□□ 0.91
U2af1Q9D883 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
U2af1Q9D883 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2af1Q9D883 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
U2af1Q9D883 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2af1Q9D883 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2af1Q9D883 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2af1Q9D883 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
U2af1Q9D883 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
U2af1Q9D883 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
U2af1Q9D883 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2af1Q9D883 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2af1Q9D883 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2af1Q9D883 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2af1Q9D883 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2af1Q9D883 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2af1Q9D883 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
U2af1Q9D883 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2af1Q9D883 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.75■□□□□ 0.91
U2af1Q9D883 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2af1Q9D883 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2af1Q9D883 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2af1Q9D883 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2af1Q9D883 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
U2af1Q9D883 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
U2af1Q9D883 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.75■□□□□ 0.91
U2af1Q9D883 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
U2af1Q9D883 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2af1Q9D883 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2af1Q9D883 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
U2af1Q9D883 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
U2af1Q9D883 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
U2af1Q9D883 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
U2af1Q9D883 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
U2af1Q9D883 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.74■□□□□ 0.91
U2af1Q9D883 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2af1Q9D883 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2af1Q9D883 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2af1Q9D883 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2af1Q9D883 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2af1Q9D883 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2af1Q9D883 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2af1Q9D883 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2af1Q9D883 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
U2af1Q9D883 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2af1Q9D883 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
U2af1Q9D883 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
U2af1Q9D883 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
U2af1Q9D883 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1Q9D883 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1Q9D883 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1Q9D883 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1Q9D883 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
U2af1Q9D883 Gm6550-201ENSMUST00000187574 993 ntBASIC20.73■□□□□ 0.91
U2af1Q9D883 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC20.73■□□□□ 0.91
U2af1Q9D883 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
U2af1Q9D883 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms