Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Gm16061-201ENSMUST00000122167 857 ntBASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Gm13474-201ENSMUST00000122466 815 ntBASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Gm29707-201ENSMUST00000196325 491 ntBASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2d4aQ9D7V1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Gm22240-201ENSMUST00000175225 82 ntBASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2d4aQ9D7V1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Asic1-205ENSMUST00000228185 1818 ntBASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Gm11336-201ENSMUST00000118168 334 ntBASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Gm2274-201ENSMUST00000184539 609 ntBASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Gm5417-201ENSMUST00000079706 384 ntBASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2d4aQ9D7V1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh2d4aQ9D7V1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh2d4aQ9D7V1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh2d4aQ9D7V1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh2d4aQ9D7V1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh2d4aQ9D7V1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Sh2d4aQ9D7V1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Sh2d4aQ9D7V1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.33■□□□□ 0.05
Sh2d4aQ9D7V1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh2d4aQ9D7V1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms