Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.83■□□□□ 0.77
Chmp5Q9D7S9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp5Q9D7S9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.83■□□□□ 0.77
Chmp5Q9D7S9 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.83■□□□□ 0.77
Chmp5Q9D7S9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.83■□□□□ 0.77
Chmp5Q9D7S9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp5Q9D7S9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.83■□□□□ 0.76
Chmp5Q9D7S9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.83■□□□□ 0.76
Chmp5Q9D7S9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp5Q9D7S9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp5Q9D7S9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp5Q9D7S9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp5Q9D7S9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp5Q9D7S9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp5Q9D7S9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC19.83■□□□□ 0.76
Chmp5Q9D7S9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Chmp5Q9D7S9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Gm10584-201ENSMUST00000207036 2628 ntBASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp5Q9D7S9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp5Q9D7S9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp5Q9D7S9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp5Q9D7S9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp5Q9D7S9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp5Q9D7S9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp5Q9D7S9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp5Q9D7S9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.8■□□□□ 0.76
Chmp5Q9D7S9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp5Q9D7S9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp5Q9D7S9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp5Q9D7S9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp5Q9D7S9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Chmp5Q9D7S9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp5Q9D7S9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp5Q9D7S9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp5Q9D7S9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Chmp5Q9D7S9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Gm13559-201ENSMUST00000120476 863 ntBASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms