Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Gm44454-201ENSMUST00000198541 138 ntBASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
5530400C23RikQ9D3I0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
5530400C23RikQ9D3I0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
5530400C23RikQ9D3I0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.52■□□□□ 0.08
5530400C23RikQ9D3I0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
5530400C23RikQ9D3I0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
5530400C23RikQ9D3I0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
5530400C23RikQ9D3I0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.52■□□□□ 0.08
5530400C23RikQ9D3I0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
5530400C23RikQ9D3I0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.52■□□□□ 0.08
5530400C23RikQ9D3I0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
5530400C23RikQ9D3I0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
5530400C23RikQ9D3I0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.52■□□□□ 0.08
5530400C23RikQ9D3I0 Ank2-226ENSMUST00000189368 339 ntBASIC15.52■□□□□ 0.08
5530400C23RikQ9D3I0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.52■□□□□ 0.08
5530400C23RikQ9D3I0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
5530400C23RikQ9D3I0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
5530400C23RikQ9D3I0 Dancr-204ENSMUST00000132389 2347 ntBASIC15.52■□□□□ 0.07
5530400C23RikQ9D3I0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
5530400C23RikQ9D3I0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
5530400C23RikQ9D3I0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
5530400C23RikQ9D3I0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
5530400C23RikQ9D3I0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
5530400C23RikQ9D3I0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
5530400C23RikQ9D3I0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
5530400C23RikQ9D3I0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
5530400C23RikQ9D3I0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
5530400C23RikQ9D3I0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
5530400C23RikQ9D3I0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms