Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trim42Q9D2H5 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Gm7791-201ENSMUST00000219066 539 ntBASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Gm18115-201ENSMUST00000221209 621 ntBASIC15.84■□□□□ 0.13
Trim42Q9D2H5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim42Q9D2H5 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trim42Q9D2H5 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim42Q9D2H5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trim42Q9D2H5 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim42Q9D2H5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Trim42Q9D2H5 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.83■□□□□ 0.13
Trim42Q9D2H5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim42Q9D2H5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim42Q9D2H5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim42Q9D2H5 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.83■□□□□ 0.13
Trim42Q9D2H5 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trim42Q9D2H5 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Gm36967-201ENSMUST00000193814 266 ntBASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim42Q9D2H5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim42Q9D2H5 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms