Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nip7Q9CXK8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nip7Q9CXK8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nip7Q9CXK8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nip7Q9CXK8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Nip7Q9CXK8 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.62■□□□□ 0.73
Nip7Q9CXK8 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.62■□□□□ 0.73
Nip7Q9CXK8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Nip7Q9CXK8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.62■□□□□ 0.73
Nip7Q9CXK8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nip7Q9CXK8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.62■□□□□ 0.73
Nip7Q9CXK8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nip7Q9CXK8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nip7Q9CXK8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nip7Q9CXK8 Haglr-201ENSMUST00000100000 2085 ntBASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nip7Q9CXK8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Gm15427-201ENSMUST00000117288 531 ntBASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.6■□□□□ 0.73
Nip7Q9CXK8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.6■□□□□ 0.73
Nip7Q9CXK8 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nip7Q9CXK8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nip7Q9CXK8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nip7Q9CXK8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nip7Q9CXK8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nip7Q9CXK8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nip7Q9CXK8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.59■□□□□ 0.73
Nip7Q9CXK8 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.59■□□□□ 0.73
Nip7Q9CXK8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nip7Q9CXK8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nip7Q9CXK8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nip7Q9CXK8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nip7Q9CXK8 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.59■□□□□ 0.73
Nip7Q9CXK8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.59■□□□□ 0.73
Nip7Q9CXK8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.58■□□□□ 0.73
Nip7Q9CXK8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nip7Q9CXK8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nip7Q9CXK8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nip7Q9CXK8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nip7Q9CXK8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nip7Q9CXK8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC19.58■□□□□ 0.72
Nip7Q9CXK8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Nip7Q9CXK8 Gm27301-201ENSMUST00000184012 127 ntBASIC19.58■□□□□ 0.72
Nip7Q9CXK8 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.58■□□□□ 0.72
Nip7Q9CXK8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.58■□□□□ 0.72
Nip7Q9CXK8 Gm44872-201ENSMUST00000207864 420 ntBASIC19.58■□□□□ 0.72
Nip7Q9CXK8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nip7Q9CXK8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nip7Q9CXK8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nip7Q9CXK8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nip7Q9CXK8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Nip7Q9CXK8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Nip7Q9CXK8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nip7Q9CXK8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nip7Q9CXK8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC19.57■□□□□ 0.72
Nip7Q9CXK8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nip7Q9CXK8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nip7Q9CXK8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nip7Q9CXK8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Nip7Q9CXK8 Gm13216-201ENSMUST00000117145 591 ntBASIC19.57■□□□□ 0.72
Nip7Q9CXK8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nip7Q9CXK8 Gm45612-201ENSMUST00000211320 160 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms