Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lrrc40Q9CRC8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Lrrc40Q9CRC8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lrrc40Q9CRC8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Lrrc40Q9CRC8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.7■□□□□ 0.1
Lrrc40Q9CRC8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Asic1-205ENSMUST00000228185 1818 ntBASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms