Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Gm18421-201ENSMUST00000204122 625 ntBASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.3□□□□□ -0.12
Krt88Q9CPR6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Krt88Q9CPR6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Gm11539-201ENSMUST00000119837 557 ntBASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Krt88Q9CPR6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Gm10812-201ENSMUST00000099864 546 ntBASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.28□□□□□ -0.12
Krt88Q9CPR6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt88Q9CPR6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms