Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf8Q99PV0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf8Q99PV0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf8Q99PV0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf8Q99PV0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf8Q99PV0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf8Q99PV0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf8Q99PV0 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Gm11025-201ENSMUST00000140773 466 ntBASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Prpf8Q99PV0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf8Q99PV0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.92□□□□□ -0.34
Prpf8Q99PV0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Chchd1-203ENSMUST00000224633 557 ntBASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms