Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Gm7774-201ENSMUST00000200064 533 ntBASIC19.46■□□□□ 0.71
RtcbQ99LF4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RtcbQ99LF4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RtcbQ99LF4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RtcbQ99LF4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RtcbQ99LF4 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.45■□□□□ 0.7
RtcbQ99LF4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RtcbQ99LF4 Gm13410-201ENSMUST00000117058 1415 ntBASIC19.45■□□□□ 0.7
RtcbQ99LF4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RtcbQ99LF4 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RtcbQ99LF4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.45■□□□□ 0.7
RtcbQ99LF4 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
RtcbQ99LF4 Gm9385-201ENSMUST00000117563 472 ntBASIC19.45■□□□□ 0.7
RtcbQ99LF4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC19.45■□□□□ 0.7
RtcbQ99LF4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RtcbQ99LF4 Gm27430-201ENSMUST00000184585 107 ntBASIC19.45■□□□□ 0.7
RtcbQ99LF4 Gm44333-201ENSMUST00000197168 107 ntBASIC19.45■□□□□ 0.7
RtcbQ99LF4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.45■□□□□ 0.7
RtcbQ99LF4 Gm5626-201ENSMUST00000222151 1058 ntBASIC19.45■□□□□ 0.7
RtcbQ99LF4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RtcbQ99LF4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RtcbQ99LF4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RtcbQ99LF4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RtcbQ99LF4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RtcbQ99LF4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RtcbQ99LF4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RtcbQ99LF4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RtcbQ99LF4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RtcbQ99LF4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC19.44■□□□□ 0.7
RtcbQ99LF4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Gm12008-201ENSMUST00000117791 755 ntBASIC19.44■□□□□ 0.7
RtcbQ99LF4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC19.44■□□□□ 0.7
RtcbQ99LF4 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.44■□□□□ 0.7
RtcbQ99LF4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RtcbQ99LF4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.43■□□□□ 0.7
RtcbQ99LF4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RtcbQ99LF4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.43■□□□□ 0.7
RtcbQ99LF4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RtcbQ99LF4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RtcbQ99LF4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.43■□□□□ 0.7
RtcbQ99LF4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.43■□□□□ 0.7
RtcbQ99LF4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RtcbQ99LF4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC19.43■□□□□ 0.7
RtcbQ99LF4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RtcbQ99LF4 Gm27622-201ENSMUST00000183779 60 ntBASIC19.43■□□□□ 0.7
RtcbQ99LF4 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.43■□□□□ 0.7
RtcbQ99LF4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RtcbQ99LF4 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RtcbQ99LF4 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC19.43■□□□□ 0.7
RtcbQ99LF4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RtcbQ99LF4 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RtcbQ99LF4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RtcbQ99LF4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RtcbQ99LF4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RtcbQ99LF4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RtcbQ99LF4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.43■□□□□ 0.7
RtcbQ99LF4 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm22065-201ENSMUST00000103753 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm22066-201ENSMUST00000103761 110 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms