Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd2Q99JR8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd2Q99JR8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd2Q99JR8 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.93■□□□□ 0.14
Smarcd2Q99JR8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd2Q99JR8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Smarcd2Q99JR8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Smarcd2Q99JR8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Gm27301-201ENSMUST00000184012 127 ntBASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd2Q99JR8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Grk6-207ENSMUST00000225925 2769 ntBASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Gm5177-201ENSMUST00000183092 997 ntBASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Gm7063-201ENSMUST00000186840 981 ntBASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Gm45747-201ENSMUST00000212203 999 ntBASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcd2Q99JR8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms