Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Gm7506-201ENSMUST00000207758 815 ntBASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 AC159205.7-201ENSMUST00000225988 692 ntBASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Pcdhb20Q91XZ9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Gm13884-201ENSMUST00000118103 829 ntBASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Gm38217-201ENSMUST00000194358 910 ntBASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb20Q91XZ9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Gm11452-201ENSMUST00000122376 690 ntBASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Gm26736-201ENSMUST00000180425 1236 ntBASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Gm6376-201ENSMUST00000209407 580 ntBASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 CT025525.2-201ENSMUST00000227743 423 ntBASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb20Q91XZ9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Gm26474-201ENSMUST00000116762 122 ntBASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Gm24380-201ENSMUST00000122696 324 ntBASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Gm19212-201ENSMUST00000216642 862 ntBASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms