Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb4Q91XX6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb4Q91XX6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb4Q91XX6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdhgb4Q91XX6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb4Q91XX6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb4Q91XX6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb4Q91XX6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb4Q91XX6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb4Q91XX6 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.77■□□□□ 0.28
Pcdhgb4Q91XX6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb4Q91XX6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb4Q91XX6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb4Q91XX6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgb4Q91XX6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgb4Q91XX6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgb4Q91XX6 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.77■□□□□ 0.27
Pcdhgb4Q91XX6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgb4Q91XX6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgb4Q91XX6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgb4Q91XX6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhgb4Q91XX6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Olfr129-201ENSMUST00000122318 993 ntBASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Mir6404-201ENSMUST00000183699 94 ntBASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb4Q91XX6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms