Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm26308-201ENSMUST00000157768 69 ntBASIC18.08■□□□□ 0.48
Trex1Q91XB0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.08■□□□□ 0.48
Trex1Q91XB0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.08■□□□□ 0.48
Trex1Q91XB0 Gm17968-201ENSMUST00000194902 784 ntBASIC18.08■□□□□ 0.48
Trex1Q91XB0 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.08■□□□□ 0.48
Trex1Q91XB0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trex1Q91XB0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trex1Q91XB0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trex1Q91XB0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Trex1Q91XB0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trex1Q91XB0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trex1Q91XB0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Trex1Q91XB0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.07■□□□□ 0.48
Trex1Q91XB0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trex1Q91XB0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trex1Q91XB0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trex1Q91XB0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trex1Q91XB0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.06■□□□□ 0.48
Trex1Q91XB0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trex1Q91XB0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trex1Q91XB0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trex1Q91XB0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trex1Q91XB0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trex1Q91XB0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.06■□□□□ 0.48
Trex1Q91XB0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.06■□□□□ 0.48
Trex1Q91XB0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.06■□□□□ 0.48
Trex1Q91XB0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.06■□□□□ 0.48
Trex1Q91XB0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trex1Q91XB0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Trex1Q91XB0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trex1Q91XB0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trex1Q91XB0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trex1Q91XB0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trex1Q91XB0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trex1Q91XB0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trex1Q91XB0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trex1Q91XB0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trex1Q91XB0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trex1Q91XB0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trex1Q91XB0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.05■□□□□ 0.48
Trex1Q91XB0 Gm17271-201ENSMUST00000165535 355 ntBASIC18.05■□□□□ 0.48
Trex1Q91XB0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trex1Q91XB0 Gm44492-201ENSMUST00000197012 141 ntBASIC18.05■□□□□ 0.48
Trex1Q91XB0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trex1Q91XB0 Chchd1-203ENSMUST00000224633 557 ntBASIC18.05■□□□□ 0.48
Trex1Q91XB0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trex1Q91XB0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trex1Q91XB0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trex1Q91XB0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trex1Q91XB0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.04■□□□□ 0.48
Trex1Q91XB0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.04■□□□□ 0.48
Trex1Q91XB0 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.04■□□□□ 0.48
Trex1Q91XB0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trex1Q91XB0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms