Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Gm23634-201ENSMUST00000175071 91 ntBASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.28□□□□□ -0.28
H1fooQ8VIK3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
H1fooQ8VIK3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
H1fooQ8VIK3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
H1fooQ8VIK3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H1fooQ8VIK3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
H1fooQ8VIK3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H1fooQ8VIK3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H1fooQ8VIK3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
H1fooQ8VIK3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H1fooQ8VIK3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H1fooQ8VIK3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
H1fooQ8VIK3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H1fooQ8VIK3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Gm13836-201ENSMUST00000121159 501 ntBASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
H1fooQ8VIK3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.27□□□□□ -0.29
H1fooQ8VIK3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 AA414768-201ENSMUST00000121924 1257 ntBASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Gm17808-201ENSMUST00000200859 894 ntBASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Gm45328-201ENSMUST00000210942 917 ntBASIC13.26□□□□□ -0.29
H1fooQ8VIK3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H1fooQ8VIK3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Gm6659-201ENSMUST00000174752 547 ntBASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Gm29518-201ENSMUST00000190858 372 ntBASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H1fooQ8VIK3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms