Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Gm43125-201ENSMUST00000201724 730 ntBASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.55□□□□□ -0.24
Cspg4Q8VHY0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cspg4Q8VHY0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms