Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Gm10033-202ENSMUST00000211874 928 ntBASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sft2d2Q8VD57 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sft2d2Q8VD57 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Gm18671-201ENSMUST00000214826 683 ntBASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Gm18025-201ENSMUST00000221733 862 ntBASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Gm4968-201ENSMUST00000071458 858 ntBASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sft2d2Q8VD57 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Sft2d2Q8VD57 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.78□□□□□ -0.36
Sft2d2Q8VD57 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sft2d2Q8VD57 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sft2d2Q8VD57 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.78□□□□□ -0.36
Sft2d2Q8VD57 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.78□□□□□ -0.36
Sft2d2Q8VD57 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sft2d2Q8VD57 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sft2d2Q8VD57 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.78□□□□□ -0.36
Sft2d2Q8VD57 Gm18958-201ENSMUST00000174258 762 ntBASIC12.78□□□□□ -0.36
Sft2d2Q8VD57 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sft2d2Q8VD57 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.78□□□□□ -0.36
Sft2d2Q8VD57 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sft2d2Q8VD57 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms