Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps39Q8R5L3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Vps39Q8R5L3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps39Q8R5L3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps39Q8R5L3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps39Q8R5L3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.87■□□□□ 0.13
Vps39Q8R5L3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.87■□□□□ 0.13
Vps39Q8R5L3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.87■□□□□ 0.13
Vps39Q8R5L3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps39Q8R5L3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps39Q8R5L3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps39Q8R5L3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.87■□□□□ 0.13
Vps39Q8R5L3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps39Q8R5L3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps39Q8R5L3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps39Q8R5L3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps39Q8R5L3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps39Q8R5L3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Vps39Q8R5L3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 Gm25016-201ENSMUST00000158399 131 ntBASIC15.86■□□□□ 0.13
Vps39Q8R5L3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.86■□□□□ 0.13
Vps39Q8R5L3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps39Q8R5L3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps39Q8R5L3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps39Q8R5L3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps39Q8R5L3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps39Q8R5L3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.84■□□□□ 0.13
Vps39Q8R5L3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps39Q8R5L3 Mir6404-201ENSMUST00000183699 94 ntBASIC15.84■□□□□ 0.13
Vps39Q8R5L3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps39Q8R5L3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Vps39Q8R5L3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps39Q8R5L3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps39Q8R5L3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Vps39Q8R5L3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps39Q8R5L3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps39Q8R5L3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps39Q8R5L3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps39Q8R5L3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 122.1 ms