Protein–RNA interactions for Protein: Q8R307

Vps18, Vacuolar protein sorting-associated protein 18 homolog, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps18Q8R307 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Vps18Q8R307 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Vps18Q8R307 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Vps18Q8R307 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Vps18Q8R307 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 Gm13836-201ENSMUST00000121159 501 ntBASIC17.37■□□□□ 0.37
Vps18Q8R307 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Vps18Q8R307 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vps18Q8R307 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.37■□□□□ 0.37
Vps18Q8R307 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.37■□□□□ 0.37
Vps18Q8R307 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.37■□□□□ 0.37
Vps18Q8R307 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.37■□□□□ 0.37
Vps18Q8R307 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps18Q8R307 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps18Q8R307 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.36■□□□□ 0.37
Vps18Q8R307 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps18Q8R307 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps18Q8R307 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps18Q8R307 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps18Q8R307 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps18Q8R307 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps18Q8R307 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vps18Q8R307 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.36■□□□□ 0.37
Vps18Q8R307 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps18Q8R307 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vps18Q8R307 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.36■□□□□ 0.37
Vps18Q8R307 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.36■□□□□ 0.37
Vps18Q8R307 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.36■□□□□ 0.37
Vps18Q8R307 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps18Q8R307 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps18Q8R307 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps18Q8R307 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Vps18Q8R307 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Vps18Q8R307 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Vps18Q8R307 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.36■□□□□ 0.37
Vps18Q8R307 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps18Q8R307 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Vps18Q8R307 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps18Q8R307 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Vps18Q8R307 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Vps18Q8R307 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps18Q8R307 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.35■□□□□ 0.37
Vps18Q8R307 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vps18Q8R307 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vps18Q8R307 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vps18Q8R307 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps18Q8R307 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vps18Q8R307 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vps18Q8R307 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vps18Q8R307 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.35■□□□□ 0.37
Vps18Q8R307 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.35■□□□□ 0.37
Vps18Q8R307 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps18Q8R307 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Vps18Q8R307 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps18Q8R307 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.35■□□□□ 0.37
Vps18Q8R307 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps18Q8R307 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps18Q8R307 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Vps18Q8R307 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps18Q8R307 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps18Q8R307 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps18Q8R307 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.35■□□□□ 0.37
Vps18Q8R307 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps18Q8R307 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps18Q8R307 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps18Q8R307 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps18Q8R307 Gm7638-201ENSMUST00000121348 967 ntBASIC17.34■□□□□ 0.37
Vps18Q8R307 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps18Q8R307 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.34■□□□□ 0.37
Vps18Q8R307 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps18Q8R307 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps18Q8R307 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.34■□□□□ 0.37
Vps18Q8R307 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps18Q8R307 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps18Q8R307 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.34■□□□□ 0.37
Vps18Q8R307 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps18Q8R307 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps18Q8R307 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps18Q8R307 Gm9987-201ENSMUST00000069768 567 ntBASIC17.34■□□□□ 0.37
Vps18Q8R307 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps18Q8R307 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms