Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfwd3Q8CIK8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Gm12895-201ENSMUST00000122214 226 ntBASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfwd3Q8CIK8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Mir6404-201ENSMUST00000183699 94 ntBASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfwd3Q8CIK8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms