Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smc4Q8CG47 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.45■□□□□ 0.7
Smc4Q8CG47 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Smc4Q8CG47 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Smc4Q8CG47 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.44■□□□□ 0.7
Smc4Q8CG47 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.44■□□□□ 0.7
Smc4Q8CG47 Gm27525-201ENSMUST00000184465 107 ntBASIC19.44■□□□□ 0.7
Smc4Q8CG47 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Smc4Q8CG47 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.44■□□□□ 0.7
Smc4Q8CG47 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc4Q8CG47 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Smc4Q8CG47 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Smc4Q8CG47 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc4Q8CG47 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Smc4Q8CG47 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Gm27628-201ENSMUST00000184911 107 ntBASIC19.42■□□□□ 0.7
Smc4Q8CG47 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.42■□□□□ 0.7
Smc4Q8CG47 AC154222.1-201ENSMUST00000223882 475 ntBASIC19.42■□□□□ 0.7
Smc4Q8CG47 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smc4Q8CG47 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc4Q8CG47 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc4Q8CG47 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.41■□□□□ 0.7
Smc4Q8CG47 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.41■□□□□ 0.7
Smc4Q8CG47 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc4Q8CG47 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc4Q8CG47 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms