Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup88Q8CEC0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Gm18421-201ENSMUST00000204122 625 ntBASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nup88Q8CEC0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nup88Q8CEC0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Nup88Q8CEC0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Nup88Q8CEC0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nup88Q8CEC0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup88Q8CEC0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup88Q8CEC0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.64■□□□□ 0.57
Nup88Q8CEC0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nup88Q8CEC0 Gm43347-201ENSMUST00000200226 580 ntBASIC18.64■□□□□ 0.57
Nup88Q8CEC0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup88Q8CEC0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Nup88Q8CEC0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup88Q8CEC0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup88Q8CEC0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Mir8098-201ENSMUST00000184011 137 ntBASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.63■□□□□ 0.57
Nup88Q8CEC0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Gm5864-201ENSMUST00000202263 970 ntBASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup88Q8CEC0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nup88Q8CEC0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Nup88Q8CEC0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup88Q8CEC0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nup88Q8CEC0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Nup88Q8CEC0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup88Q8CEC0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nup88Q8CEC0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.61■□□□□ 0.57
Nup88Q8CEC0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup88Q8CEC0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.61■□□□□ 0.57
Nup88Q8CEC0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup88Q8CEC0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.61■□□□□ 0.57
Nup88Q8CEC0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup88Q8CEC0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nup88Q8CEC0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup88Q8CEC0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.61■□□□□ 0.57
Nup88Q8CEC0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms