Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcpip1Q8CDG3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcpip1Q8CDG3 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.03■□□□□ 0.32
Vcpip1Q8CDG3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcpip1Q8CDG3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 Mir770-201ENSMUST00000103252 94 ntBASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 Gm7284-201ENSMUST00000131667 944 ntBASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 Gm25016-201ENSMUST00000158399 131 ntBASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcpip1Q8CDG3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Vcpip1Q8CDG3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Vcpip1Q8CDG3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vcpip1Q8CDG3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Vcpip1Q8CDG3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vcpip1Q8CDG3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Vcpip1Q8CDG3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vcpip1Q8CDG3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vcpip1Q8CDG3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vcpip1Q8CDG3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Gm5587-201ENSMUST00000206270 674 ntBASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcpip1Q8CDG3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Gm9889-202ENSMUST00000206983 1577 ntBASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vcpip1Q8CDG3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vcpip1Q8CDG3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vcpip1Q8CDG3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vcpip1Q8CDG3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vcpip1Q8CDG3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vcpip1Q8CDG3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms