Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc60Q8C4J0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Gm44357-201ENSMUST00000195897 142 ntBASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Gm19658-201ENSMUST00000196231 138 ntBASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Gm44367-201ENSMUST00000196836 138 ntBASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Gm44350-201ENSMUST00000197197 138 ntBASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Gm44390-201ENSMUST00000197533 144 ntBASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Gm44313-201ENSMUST00000198018 138 ntBASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Gm44486-201ENSMUST00000198508 138 ntBASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Gm44314-201ENSMUST00000199263 138 ntBASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Gm44394-201ENSMUST00000199558 138 ntBASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Gm44484-201ENSMUST00000199873 138 ntBASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Gm44466-201ENSMUST00000200264 138 ntBASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Gm44359-201ENSMUST00000200671 138 ntBASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 App-207ENSMUST00000227737 2827 ntBASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc60Q8C4J0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc60Q8C4J0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ccdc60Q8C4J0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ccdc60Q8C4J0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc60Q8C4J0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc60Q8C4J0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Ccdc60Q8C4J0 Gm8097-201ENSMUST00000117903 829 ntBASIC20.14■□□□□ 0.81
Ccdc60Q8C4J0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc60Q8C4J0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC20.14■□□□□ 0.81
Ccdc60Q8C4J0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc60Q8C4J0 Gm18622-201ENSMUST00000219361 595 ntBASIC20.14■□□□□ 0.81
Ccdc60Q8C4J0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc60Q8C4J0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc60Q8C4J0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms