Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trub1Q8C0D0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trub1Q8C0D0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trub1Q8C0D0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trub1Q8C0D0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trub1Q8C0D0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trub1Q8C0D0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trub1Q8C0D0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trub1Q8C0D0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trub1Q8C0D0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Gm15165-201ENSMUST00000118140 502 ntBASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.31■□□□□ 0.2
Trub1Q8C0D0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trub1Q8C0D0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Gm27867-201ENSMUST00000184778 125 ntBASIC16.29■□□□□ 0.2
Trub1Q8C0D0 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trub1Q8C0D0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trub1Q8C0D0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms