Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Gm15358-201ENSMUST00000119249 520 ntBASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Gm14494-201ENSMUST00000118786 435 ntBASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Gm37153-201ENSMUST00000193637 231 ntBASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Hivep3-201ENSMUST00000084306 2973 ntBASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf2Q8BZT2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Gm19164-201ENSMUST00000210667 640 ntBASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.99■□□□□ 0.15
Sh3rf2Q8BZT2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf2Q8BZT2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms