Protein–RNA interactions for Protein: Q8BSQ9

Pbrm1, Protein polybromo-1, mousemouse

Known RBP Predictions only

Length 1,634 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbrm1Q8BSQ9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Gm14026-201ENSMUST00000120625 1789 ntBASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Gm15483-201ENSMUST00000120338 456 ntBASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Gm18766-201ENSMUST00000189811 808 ntBASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Gm8597-201ENSMUST00000191525 1109 ntBASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Gm45059-201ENSMUST00000205558 1077 ntBASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pbrm1Q8BSQ9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pbrm1Q8BSQ9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Pbrm1Q8BSQ9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pbrm1Q8BSQ9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pbrm1Q8BSQ9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pbrm1Q8BSQ9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pbrm1Q8BSQ9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pbrm1Q8BSQ9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pbrm1Q8BSQ9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pbrm1Q8BSQ9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pbrm1Q8BSQ9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Pbrm1Q8BSQ9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pbrm1Q8BSQ9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pbrm1Q8BSQ9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC24.41■■□□□ 1.5
Pbrm1Q8BSQ9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Pbrm1Q8BSQ9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pbrm1Q8BSQ9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Pbrm1Q8BSQ9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC24.41■■□□□ 1.5
Pbrm1Q8BSQ9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pbrm1Q8BSQ9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC24.41■■□□□ 1.5
Pbrm1Q8BSQ9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pbrm1Q8BSQ9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pbrm1Q8BSQ9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pbrm1Q8BSQ9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC24.4■■□□□ 1.5
Pbrm1Q8BSQ9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Pbrm1Q8BSQ9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC24.4■■□□□ 1.5
Pbrm1Q8BSQ9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Pbrm1Q8BSQ9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pbrm1Q8BSQ9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pbrm1Q8BSQ9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pbrm1Q8BSQ9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pbrm1Q8BSQ9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC24.39■■□□□ 1.5
Pbrm1Q8BSQ9 Gm12859-201ENSMUST00000117834 427 ntBASIC24.39■■□□□ 1.5
Pbrm1Q8BSQ9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Pbrm1Q8BSQ9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pbrm1Q8BSQ9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pbrm1Q8BSQ9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC24.39■■□□□ 1.5
Pbrm1Q8BSQ9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pbrm1Q8BSQ9 Gm5357-201ENSMUST00000212720 1924 ntBASIC24.39■■□□□ 1.49
Pbrm1Q8BSQ9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pbrm1Q8BSQ9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pbrm1Q8BSQ9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pbrm1Q8BSQ9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pbrm1Q8BSQ9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC24.39■■□□□ 1.49
Pbrm1Q8BSQ9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
Pbrm1Q8BSQ9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pbrm1Q8BSQ9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pbrm1Q8BSQ9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pbrm1Q8BSQ9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pbrm1Q8BSQ9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Pbrm1Q8BSQ9 Gm13233-201ENSMUST00000118760 1443 ntBASIC24.38■■□□□ 1.49
Pbrm1Q8BSQ9 Gm13244-201ENSMUST00000118855 1446 ntBASIC24.38■■□□□ 1.49
Pbrm1Q8BSQ9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pbrm1Q8BSQ9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC24.38■■□□□ 1.49
Pbrm1Q8BSQ9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC24.38■■□□□ 1.49
Pbrm1Q8BSQ9 Gm25857-201ENSMUST00000082788 129 ntBASIC24.38■■□□□ 1.49
Pbrm1Q8BSQ9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pbrm1Q8BSQ9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pbrm1Q8BSQ9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pbrm1Q8BSQ9 Gm8096-201ENSMUST00000209921 1591 ntBASIC24.37■■□□□ 1.49
Pbrm1Q8BSQ9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pbrm1Q8BSQ9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Pbrm1Q8BSQ9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC24.37■■□□□ 1.49
Pbrm1Q8BSQ9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pbrm1Q8BSQ9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pbrm1Q8BSQ9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pbrm1Q8BSQ9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC24.37■■□□□ 1.49
Pbrm1Q8BSQ9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Pbrm1Q8BSQ9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pbrm1Q8BSQ9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pbrm1Q8BSQ9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC24.36■■□□□ 1.49
Pbrm1Q8BSQ9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pbrm1Q8BSQ9 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pbrm1Q8BSQ9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC24.36■■□□□ 1.49
Pbrm1Q8BSQ9 Gm9719-201ENSMUST00000162765 543 ntBASIC24.36■■□□□ 1.49
Pbrm1Q8BSQ9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC24.36■■□□□ 1.49
Pbrm1Q8BSQ9 AC154239.3-201ENSMUST00000226933 674 ntBASIC24.36■■□□□ 1.49
Pbrm1Q8BSQ9 Gm45293-201ENSMUST00000209754 1812 ntBASIC24.36■■□□□ 1.49
Pbrm1Q8BSQ9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pbrm1Q8BSQ9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pbrm1Q8BSQ9 Gm13337-201ENSMUST00000119183 1594 ntBASIC24.36■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms