Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Gm28033-201ENSMUST00000184224 96 ntBASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf4Q8BQZ5 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Prob1-201ENSMUST00000097619 3021 ntBASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Mir3081-201ENSMUST00000175305 84 ntBASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf4Q8BQZ5 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Gm27357-201ENSMUST00000183754 135 ntBASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4Q8BQZ5 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Sybu-209ENSMUST00000228639 4113 ntBASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms