Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubp1Q811S7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubp1Q811S7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubp1Q811S7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Ubp1Q811S7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubp1Q811S7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubp1Q811S7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubp1Q811S7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubp1Q811S7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.59■□□□□ 0.09
Ubp1Q811S7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubp1Q811S7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ubp1Q811S7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ubp1Q811S7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ubp1Q811S7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ubp1Q811S7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.58■□□□□ 0.08
Ubp1Q811S7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.58■□□□□ 0.08
Ubp1Q811S7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ubp1Q811S7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Gm13323-201ENSMUST00000120245 1151 ntBASIC15.57■□□□□ 0.08
Ubp1Q811S7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.57■□□□□ 0.08
Ubp1Q811S7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.57■□□□□ 0.08
Ubp1Q811S7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.57■□□□□ 0.08
Ubp1Q811S7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ubp1Q811S7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ubp1Q811S7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Gm24589-201ENSMUST00000116692 94 ntBASIC15.56■□□□□ 0.08
Ubp1Q811S7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Gm25406-201ENSMUST00000157599 105 ntBASIC15.56■□□□□ 0.08
Ubp1Q811S7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Gm7506-201ENSMUST00000207758 815 ntBASIC15.56■□□□□ 0.08
Ubp1Q811S7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.56■□□□□ 0.08
Ubp1Q811S7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubp1Q811S7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.55■□□□□ 0.08
Ubp1Q811S7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms