Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Gm19164-201ENSMUST00000210667 640 ntBASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Gm7787-201ENSMUST00000216858 688 ntBASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.42■□□□□ 0.38
Usp6nlQ80XC3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Gm11025-201ENSMUST00000140773 466 ntBASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Gm6257-201ENSMUST00000163864 910 ntBASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Gm8396-201ENSMUST00000057361 823 ntBASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp6nlQ80XC3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp6nlQ80XC3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Usp6nlQ80XC3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Usp6nlQ80XC3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Gm14701-201ENSMUST00000117156 348 ntBASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Gm7063-201ENSMUST00000186840 981 ntBASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms