Protein–RNA interactions for Protein: Q80U95

Ube3c, Ubiquitin-protein ligase E3C, mousemouse

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3cQ80U95 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.62■□□□□ 0.57
Ube3cQ80U95 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.62■□□□□ 0.57
Ube3cQ80U95 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Gm10175-201ENSMUST00000086013 645 ntBASIC18.62■□□□□ 0.57
Ube3cQ80U95 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.62■□□□□ 0.57
Ube3cQ80U95 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.62■□□□□ 0.57
Ube3cQ80U95 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.61■□□□□ 0.57
Ube3cQ80U95 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.61■□□□□ 0.57
Ube3cQ80U95 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3cQ80U95 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.6■□□□□ 0.57
Ube3cQ80U95 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3cQ80U95 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.6■□□□□ 0.57
Ube3cQ80U95 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3cQ80U95 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3cQ80U95 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3cQ80U95 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3cQ80U95 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3cQ80U95 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ube3cQ80U95 Gm25911-201ENSMUST00000157621 56 ntBASIC18.59■□□□□ 0.57
Ube3cQ80U95 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.59■□□□□ 0.57
Ube3cQ80U95 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.59■□□□□ 0.57
Ube3cQ80U95 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.59■□□□□ 0.57
Ube3cQ80U95 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.59■□□□□ 0.57
Ube3cQ80U95 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.59■□□□□ 0.57
Ube3cQ80U95 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3cQ80U95 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3cQ80U95 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3cQ80U95 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3cQ80U95 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3cQ80U95 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3cQ80U95 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Ube3cQ80U95 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3cQ80U95 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3cQ80U95 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ube3cQ80U95 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ube3cQ80U95 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ube3cQ80U95 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms