Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm24270-201ENSMUST00000102326 57 ntBASIC14.57□□□□□ -0.08
Pif1Q80SX8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Gm24245-201ENSMUST00000157318 57 ntBASIC14.57□□□□□ -0.08
Pif1Q80SX8 Mir6404-201ENSMUST00000183699 94 ntBASIC14.57□□□□□ -0.08
Pif1Q80SX8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.57□□□□□ -0.08
Pif1Q80SX8 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.57□□□□□ -0.08
Pif1Q80SX8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Gm4995-201ENSMUST00000117247 432 ntBASIC14.56□□□□□ -0.08
Pif1Q80SX8 Gm14822-201ENSMUST00000122247 291 ntBASIC14.56□□□□□ -0.08
Pif1Q80SX8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pif1Q80SX8 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.56□□□□□ -0.08
Pif1Q80SX8 Gm18622-201ENSMUST00000219361 595 ntBASIC14.56□□□□□ -0.08
Pif1Q80SX8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Pif1Q80SX8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pif1Q80SX8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.55□□□□□ -0.08
Pif1Q80SX8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm8825-201ENSMUST00000182565 998 ntBASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm4518-201ENSMUST00000182638 718 ntBASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.55□□□□□ -0.08
Pif1Q80SX8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.55□□□□□ -0.08
Pif1Q80SX8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pif1Q80SX8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pif1Q80SX8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms