Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.97■□□□□ 0.63
Sned1Q70E20 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.97■□□□□ 0.63
Sned1Q70E20 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sned1Q70E20 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sned1Q70E20 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sned1Q70E20 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.97■□□□□ 0.63
Sned1Q70E20 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sned1Q70E20 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sned1Q70E20 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.96■□□□□ 0.63
Sned1Q70E20 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Sned1Q70E20 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sned1Q70E20 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sned1Q70E20 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Sned1Q70E20 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.96■□□□□ 0.63
Sned1Q70E20 Gm14767-201ENSMUST00000121559 586 ntBASIC18.96■□□□□ 0.63
Sned1Q70E20 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.96■□□□□ 0.63
Sned1Q70E20 Gm43433-201ENSMUST00000196573 481 ntBASIC18.96■□□□□ 0.63
Sned1Q70E20 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.96■□□□□ 0.63
Sned1Q70E20 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sned1Q70E20 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sned1Q70E20 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sned1Q70E20 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sned1Q70E20 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sned1Q70E20 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.96■□□□□ 0.63
Sned1Q70E20 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sned1Q70E20 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sned1Q70E20 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sned1Q70E20 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sned1Q70E20 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sned1Q70E20 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sned1Q70E20 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sned1Q70E20 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sned1Q70E20 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sned1Q70E20 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.95■□□□□ 0.62
Sned1Q70E20 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.95■□□□□ 0.62
Sned1Q70E20 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.95■□□□□ 0.62
Sned1Q70E20 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sned1Q70E20 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sned1Q70E20 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sned1Q70E20 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sned1Q70E20 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.95■□□□□ 0.62
Sned1Q70E20 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sned1Q70E20 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sned1Q70E20 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sned1Q70E20 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sned1Q70E20 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sned1Q70E20 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sned1Q70E20 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sned1Q70E20 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sned1Q70E20 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Sned1Q70E20 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.94■□□□□ 0.62
Sned1Q70E20 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC18.94■□□□□ 0.62
Sned1Q70E20 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
Sned1Q70E20 Gm15321-201ENSMUST00000121290 288 ntBASIC18.94■□□□□ 0.62
Sned1Q70E20 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sned1Q70E20 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sned1Q70E20 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sned1Q70E20 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sned1Q70E20 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sned1Q70E20 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sned1Q70E20 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.94■□□□□ 0.62
Sned1Q70E20 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sned1Q70E20 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sned1Q70E20 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.94■□□□□ 0.62
Sned1Q70E20 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sned1Q70E20 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sned1Q70E20 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.94■□□□□ 0.62
Sned1Q70E20 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sned1Q70E20 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sned1Q70E20 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sned1Q70E20 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sned1Q70E20 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sned1Q70E20 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sned1Q70E20 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Sned1Q70E20 Gm6912-201ENSMUST00000117218 544 ntBASIC18.93■□□□□ 0.62
Sned1Q70E20 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sned1Q70E20 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sned1Q70E20 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sned1Q70E20 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sned1Q70E20 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.93■□□□□ 0.62
Sned1Q70E20 Gm38225-201ENSMUST00000194001 393 ntBASIC18.93■□□□□ 0.62
Sned1Q70E20 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.93■□□□□ 0.62
Sned1Q70E20 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sned1Q70E20 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sned1Q70E20 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sned1Q70E20 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.93■□□□□ 0.62
Sned1Q70E20 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sned1Q70E20 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sned1Q70E20 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sned1Q70E20 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sned1Q70E20 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.93■□□□□ 0.62
Sned1Q70E20 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.92■□□□□ 0.62
Sned1Q70E20 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sned1Q70E20 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sned1Q70E20 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sned1Q70E20 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sned1Q70E20 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sned1Q70E20 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Sned1Q70E20 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sned1Q70E20 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms