Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Gm15165-201ENSMUST00000118140 502 ntBASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Gm27867-201ENSMUST00000184778 125 ntBASIC17.49■□□□□ 0.39
Herc4Q6PAV2 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herc4Q6PAV2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Herc4Q6PAV2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herc4Q6PAV2 Prob1-201ENSMUST00000097619 3021 ntBASIC17.48■□□□□ 0.39
Herc4Q6PAV2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herc4Q6PAV2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Herc4Q6PAV2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herc4Q6PAV2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Herc4Q6PAV2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herc4Q6PAV2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herc4Q6PAV2 Gm12895-201ENSMUST00000122214 226 ntBASIC17.48■□□□□ 0.39
Herc4Q6PAV2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herc4Q6PAV2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herc4Q6PAV2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herc4Q6PAV2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herc4Q6PAV2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herc4Q6PAV2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Gm18669-201ENSMUST00000216049 778 ntBASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc4Q6PAV2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Herc4Q6PAV2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Herc4Q6PAV2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Herc4Q6PAV2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Herc4Q6PAV2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Herc4Q6PAV2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.46■□□□□ 0.39
Herc4Q6PAV2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Herc4Q6PAV2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Herc4Q6PAV2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Herc4Q6PAV2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Herc4Q6PAV2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Herc4Q6PAV2 Gm15372-201ENSMUST00000120729 834 ntBASIC17.46■□□□□ 0.39
Herc4Q6PAV2 Gm6257-201ENSMUST00000163864 910 ntBASIC17.46■□□□□ 0.39
Herc4Q6PAV2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Herc4Q6PAV2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Herc4Q6PAV2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.46■□□□□ 0.39
Herc4Q6PAV2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Herc4Q6PAV2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.46■□□□□ 0.38
Herc4Q6PAV2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Herc4Q6PAV2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Herc4Q6PAV2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Herc4Q6PAV2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 App-207ENSMUST00000227737 2827 ntBASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms