Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Gm37153-201ENSMUST00000193637 231 ntBASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smchd1Q6P5D8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smchd1Q6P5D8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smchd1Q6P5D8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smchd1Q6P5D8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smchd1Q6P5D8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smchd1Q6P5D8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.29■□□□□ 0.36
Smchd1Q6P5D8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smchd1Q6P5D8 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.29■□□□□ 0.36
Smchd1Q6P5D8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Smchd1Q6P5D8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.29■□□□□ 0.36
Smchd1Q6P5D8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smchd1Q6P5D8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smchd1Q6P5D8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smchd1Q6P5D8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smchd1Q6P5D8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smchd1Q6P5D8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smchd1Q6P5D8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smchd1Q6P5D8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.27■□□□□ 0.36
Smchd1Q6P5D8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smchd1Q6P5D8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smchd1Q6P5D8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smchd1Q6P5D8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smchd1Q6P5D8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smchd1Q6P5D8 Mir3113-201ENSMUST00000175478 76 ntBASIC17.27■□□□□ 0.36
Smchd1Q6P5D8 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.27■□□□□ 0.36
Smchd1Q6P5D8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smchd1Q6P5D8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smchd1Q6P5D8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smchd1Q6P5D8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Smchd1Q6P5D8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smchd1Q6P5D8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smchd1Q6P5D8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Smchd1Q6P5D8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smchd1Q6P5D8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smchd1Q6P5D8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smchd1Q6P5D8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.27■□□□□ 0.35
Smchd1Q6P5D8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smchd1Q6P5D8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smchd1Q6P5D8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms