Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.74■□□□□ 0.43
Abcf1Q6P542 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.74■□□□□ 0.43
Abcf1Q6P542 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Phf7-203ENSMUST00000226565 1971 ntBASIC17.73■□□□□ 0.43
Abcf1Q6P542 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.73■□□□□ 0.43
Abcf1Q6P542 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Gm5587-201ENSMUST00000206270 674 ntBASIC17.73■□□□□ 0.43
Abcf1Q6P542 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abcf1Q6P542 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abcf1Q6P542 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.72■□□□□ 0.43
Abcf1Q6P542 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Abcf1Q6P542 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Abcf1Q6P542 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Abcf1Q6P542 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.71■□□□□ 0.43
Abcf1Q6P542 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.71■□□□□ 0.43
Abcf1Q6P542 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Abcf1Q6P542 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.71■□□□□ 0.43
Abcf1Q6P542 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Abcf1Q6P542 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms