Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.69■□□□□ 0.42
Hdac4Q6NZM9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Hdac4Q6NZM9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hdac4Q6NZM9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.69■□□□□ 0.42
Hdac4Q6NZM9 Gm15372-201ENSMUST00000120729 834 ntBASIC17.69■□□□□ 0.42
Hdac4Q6NZM9 Gm27867-201ENSMUST00000184778 125 ntBASIC17.69■□□□□ 0.42
Hdac4Q6NZM9 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.69■□□□□ 0.42
Hdac4Q6NZM9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hdac4Q6NZM9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hdac4Q6NZM9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Hdac4Q6NZM9 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.69■□□□□ 0.42
Hdac4Q6NZM9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hdac4Q6NZM9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hdac4Q6NZM9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hdac4Q6NZM9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hdac4Q6NZM9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac4Q6NZM9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Hdac4Q6NZM9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac4Q6NZM9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac4Q6NZM9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Hdac4Q6NZM9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac4Q6NZM9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Hdac4Q6NZM9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac4Q6NZM9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.68■□□□□ 0.42
Hdac4Q6NZM9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hdac4Q6NZM9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac4Q6NZM9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac4Q6NZM9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac4Q6NZM9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac4Q6NZM9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac4Q6NZM9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac4Q6NZM9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm8825-201ENSMUST00000182565 998 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm4518-201ENSMUST00000182638 718 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac4Q6NZM9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac4Q6NZM9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac4Q6NZM9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac4Q6NZM9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac4Q6NZM9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac4Q6NZM9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac4Q6NZM9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.66■□□□□ 0.42
Hdac4Q6NZM9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac4Q6NZM9 Gm25745-201ENSMUST00000174945 133 ntBASIC17.66■□□□□ 0.42
Hdac4Q6NZM9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms