Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.41■□□□□ 0.54
Scaf8Q6DID3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Scaf8Q6DID3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Scaf8Q6DID3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scaf8Q6DID3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scaf8Q6DID3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.4■□□□□ 0.54
Scaf8Q6DID3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scaf8Q6DID3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.4■□□□□ 0.54
Scaf8Q6DID3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scaf8Q6DID3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.4■□□□□ 0.54
Scaf8Q6DID3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scaf8Q6DID3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.4■□□□□ 0.54
Scaf8Q6DID3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scaf8Q6DID3 Gm8969-201ENSMUST00000199694 526 ntBASIC18.4■□□□□ 0.54
Scaf8Q6DID3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.4■□□□□ 0.54
Scaf8Q6DID3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scaf8Q6DID3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scaf8Q6DID3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scaf8Q6DID3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scaf8Q6DID3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.39■□□□□ 0.54
Scaf8Q6DID3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Scaf8Q6DID3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf8Q6DID3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf8Q6DID3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.39■□□□□ 0.53
Scaf8Q6DID3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Scaf8Q6DID3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf8Q6DID3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Scaf8Q6DID3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Scaf8Q6DID3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.39■□□□□ 0.53
Scaf8Q6DID3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC18.39■□□□□ 0.53
Scaf8Q6DID3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.39■□□□□ 0.53
Scaf8Q6DID3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf8Q6DID3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf8Q6DID3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf8Q6DID3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf8Q6DID3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf8Q6DID3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf8Q6DID3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf8Q6DID3 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.38■□□□□ 0.53
Scaf8Q6DID3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf8Q6DID3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf8Q6DID3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf8Q6DID3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf8Q6DID3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Scaf8Q6DID3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf8Q6DID3 Gm27430-201ENSMUST00000184585 107 ntBASIC18.38■□□□□ 0.53
Scaf8Q6DID3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.38■□□□□ 0.53
Scaf8Q6DID3 Gm44333-201ENSMUST00000197168 107 ntBASIC18.38■□□□□ 0.53
Scaf8Q6DID3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf8Q6DID3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.38■□□□□ 0.53
Scaf8Q6DID3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.38■□□□□ 0.53
Scaf8Q6DID3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf8Q6DID3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf8Q6DID3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.38■□□□□ 0.53
Scaf8Q6DID3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf8Q6DID3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf8Q6DID3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Scaf8Q6DID3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf8Q6DID3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Gm13823-201ENSMUST00000119930 345 ntBASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf8Q6DID3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Gm14127-201ENSMUST00000117906 678 ntBASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Gm13223-201ENSMUST00000118609 747 ntBASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Gm19164-201ENSMUST00000210667 640 ntBASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms